{"id":1735,"date":"2012-12-03T16:19:31","date_gmt":"2012-12-03T20:19:31","guid":{"rendered":"http:\/\/mat.tepper.cmu.edu\/blog\/?p=1735"},"modified":"2012-12-03T16:19:31","modified_gmt":"2012-12-03T20:19:31","slug":"registries-to-avoid-publication-bias","status":"publish","type":"post","link":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/2012\/12\/03\/registries-to-avoid-publication-bias\/","title":{"rendered":"Registries To Avoid Publication Bias"},"content":{"rendered":"<p>I have been thinking about the issue of how a field knows what they know. \u00a0In a <a href=\"http:\/\/mat.tepper.cmu.edu\/blog\/?p=1732\">previous post<\/a>, I wrote about how the field of social psychology is working through the implications of\u00a0fraudulent\u00a0research, and is closely examining the cozy interactions between journals, reviewers, and famous researchers. \u00a0 And any empirical field based on statistical analysis has got to live with the fact that if there 1000 results in the field, some number (50 perhaps, if p=.05 is a normal cutoff and lots of results are just under that value) are going to be wrong just because the statistical test created a false positive. \u00a0Of course, replication can help determine what is real and what is not, but how often do you see a paper &#8220;Confirming Prof. X&#8217;s result&#8221;? \u00a0Definitely not a smooth path to tenure.<\/p>\n<p>This is worse if\u00a0malevolent forces are at work. \u00a0Suppose a pharmaceutical company has bet the firm on drug X, and they want to show that drug X works. \u00a0And suppose drug X doesn&#8217;t work. \u00a0No problem! \u00a0Simply find 20 researchers, sign them to a non-disclosure, and ask them to see if drug X works. \u00a0Chances are one or more researchers will come back with a statistically significant result (in fact, there is about a 65% chance that one or more will, given a p=.05). \u00a0Publish the result, and voila! \u00a0The company is saved! \u00a0Hurray for\u00a0statistics and capitalism!<\/p>\n<p>Fortunately, I am not the first to see this issue: \u00a0way back in 1997, the US Congress passed a bill requiring the registration of clinical trials, before the trials get underway.<\/p>\n<blockquote><p>The first U.S. Federal law to require trial registration was the\u00a0<a title=\"FDAMA PDF - opens new window\" href=\"http:\/\/www.gpo.gov\/fdsys\/pkg\/PLAW-105publ115\/pdf\/PLAW-105publ115.pdf#page=16\">Food and Drug Administration Modernization Act of 1997 (FDAMA)<\/a>\u00a0(PDF).<\/p>\n<p>Section 113 of FDAMA required that the National Institutes of Health (NIH) create a public information resource on certain clinical trials regulated by the Food and Drug Administration (FDA). Specifically, FDAMA 113 required that the registry include information about federally or privately funded clinical trials conducted under investigational new drug applications (INDs) to test the effectiveness of experimental drugs for patients with serious or life-threatening diseases or conditions.<\/p><\/blockquote>\n<p>This led to the creation of <a href=\"http:\/\/www.clinicaltrials.gov\">clinicaltrials.gov<\/a> (where I am getting this history and the quotes) in 2000. \u00a0This was followed by major journals requiring registration before papers could be considered for publication:<\/p>\n<blockquote><p>In 2005 the\u00a0<a title=\"ICMJE - opens new window\" href=\"http:\/\/icmje.org\/\">International Committee of Medical Journal Editors<\/a>\u00a0(ICMJE) began to require trial registration as a condition of publication.<\/p>\n<ul>\n<li>ICMJE Uniform Requirements for Manuscripts Submitted to Biomedical Journals &#8211;\u00a0<a title=\"ICMJE Obligation to Register - opens new window\" href=\"http:\/\/www.icmje.org\/publishing_10register.html\">Obligation to Register Clinical Trials<\/a><\/li>\n<li>ICMJE\u00a0<a title=\"ICMLE FAQ about Registration - opens new window\" href=\"http:\/\/www.icmje.org\/faq_clinical.html\">Frequently Asked Questions about Clinical Trials Registration<\/a><\/li>\n<\/ul>\n<\/blockquote>\n<div>The site now lists more than 130,000 trials from around the world. \u00a0It seems this is a great way to avoid some (but by no means all!) fraud and errors.<\/div>\n<p><div>I think it would be useful to have such systems in operations research. \u00a0When I ran a <a href=\"http:\/\/dimacs.rutgers.edu\/Challenges\/\">DIMACS Challenge<\/a> twenty years ago, I had hoped to keep up with results on graph coloring so we had a better idea of &#8220;what we know&#8221;: \u00a0then and now there are graph coloring values in the published literature that cannot be correct (since, for instance, they contradict published clique values: \u00a0something must be wrong!). \u00a0I even <a href=\"http:\/\/mat.tepper.cmu.edu\/blog\/?p=797\">wrote about a system more than two years ago<\/a>\u00a0but I have been unable to find enough time to take the system seriously. \u00a0I do continue to <a href=\"http:\/\/mat.tepper.cmu.edu\/TOURN\">track results in sports scheduling<\/a>, but we as a field need more such systems.<\/div>\n<div><\/div>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>I have been thinking about the issue of how a field knows what they know. \u00a0In a previous post, I wrote about how the field of social psychology is working through the implications of\u00a0fraudulent\u00a0research, and is closely examining the cozy interactions between journals, reviewers, and famous researchers. \u00a0 And any empirical field based on statistical &hellip; <a href=\"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/2012\/12\/03\/registries-to-avoid-publication-bias\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;Registries To Avoid Publication Bias&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[10,12],"tags":[],"class_list":["post-1735","post","type-post","status-publish","format-standard","hentry","category-challenges","category-computing"],"jetpack_featured_media_url":"","_links":{"self":[{"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/posts\/1735","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/comments?post=1735"}],"version-history":[{"count":0,"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/posts\/1735\/revisions"}],"wp:attachment":[{"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/media?parent=1735"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/categories?post=1735"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/mat.tepper.cmu.edu\/blog\/index.php\/wp-json\/wp\/v2\/tags?post=1735"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}